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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20496.1PFAM: basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein. (366 aa)    
Predicted Functional Partners:
ACS20517.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_2135 ABC transporter related.
 
 
 0.971
ACS20515.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_1485 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
ACS21454.1
PFAM: inner-membrane translocator; KEGG: psa:PST_3579 probable permease of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
ACS16935.1
PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0767 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
ACS19281.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_4429 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.966
ACS19283.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3576 ABC transporter-related protein.
 
 
 0.961
ACS16937.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0765 ABC transporter.
 
 
 0.960
ACS21452.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_1002 ABC transporter.
 
 
 0.957
ACS20516.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_1133 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
ACS21453.1
PFAM: inner-membrane translocator; KEGG: psb:Psyr_1003 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.841
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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