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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20500.1PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily transporter. (437 aa)    
Predicted Functional Partners:
ACS20499.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_4400 LysR family transcriptional regulator.
 
    0.625
ACS20480.1
PFAM: cytochrome c class I; KEGG: dac:Daci_5620 cytochrome c, mono-and diheme variant-like protein.
  
     0.572
ACS22490.1
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: bph:Bphy_7813 chorismate mutase.
 
 
   0.524
ACS18047.1
PFAM: Anti sigma-E protein RseA family protein; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA.
  
     0.504
ACS20549.1
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: aav:Aave_1098 permease for cytosine/purines, uracil, thiamine, allantoin.
 
  
 0.501
ACS16965.1
PFAM: extracellular solute-binding protein family 1; KEGG: rfr:Rfer_0883 extracellular solute-binding protein.
 
  
 0.500
ACS17916.1
PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein.
 
  
 0.496
ACS17397.1
PFAM: ThiJ/PfpI domain protein; KEGG: bcm:Bcenmc03_6451 ThiJ/PfpI domain-containing protein.
 
    0.489
ACS19528.1
KEGG: pol:Bpro_0561 2-keto-4-pentenoate hydratase-like.
 
    0.462
ACS19782.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3684 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.444
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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