close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20522.1PFAM: natural resistance-associated macrophage protein; KEGG: rfr:Rfer_1218 natural resistance-associated macrophage protein. (423 aa)    
Predicted Functional Partners:
ACS19405.1
PFAM: ABC-3 protein; KEGG: pst:PSPTO_2634 cation ABC transporter, permease protein.
  
  
 0.701
ACS20523.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_1024 LysR family transcriptional regulator.
     
 0.569
ACS20533.1
Magnesium-translocating P-type ATPase; KEGG: pfl:PFL_4078 magnesium-transporting ATPase MgtA; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase.
   
 0.540
ACS20528.1
KEGG: bra:BRADO0957 TrapT family, DctQ subunit C4-dicarboxylate transport.
 
     0.488
ACS19406.1
PFAM: periplasmic solute binding protein; KEGG: lch:Lcho_3560 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.480
ACS19404.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001066 probable zinc ABC transporter, ATP-binding protein.
  
  
 0.473
ACS20520.1
KEGG: dac:Daci_5909 xanthine dehydrogenase, molybdopterin binding subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
     
 0.453
ACS20521.1
TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: dac:Daci_5910 xanthine dehydrogenase, small subunit.
       0.447
ACS19910.1
PFAM: protein of unknown function DUF1445; KEGG: pol:Bpro_1776 hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.438
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.423
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.