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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20523.1Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_1024 LysR family transcriptional regulator. (306 aa)    
Predicted Functional Partners:
ACS20522.1
PFAM: natural resistance-associated macrophage protein; KEGG: rfr:Rfer_1218 natural resistance-associated macrophage protein.
     
 0.569
ACS20524.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mag:amb0179 indolepyruvate ferredoxin oxidoreductase.
       0.562
ACS20525.1
KEGG: mag:amb0180 putative indolepyruvate oxidoreductase subunit B.
       0.545
ACS20526.1
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pna:Pnap_1020 FMN-dependent alpha-hydroxy acid dehydrogenase.
     
 0.509
ACS20519.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1482 transcriptional regulator, LysR family.
 
    
0.439
ACS20530.1
PFAM: thioesterase superfamily protein; KEGG: lch:Lcho_0444 4-hydroxybenzoyl-CoA thioesterase.
       0.438
ACS20529.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bja:blr7841 hypothetical protein.
  
    0.437
ACS20527.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpd:RPD_1885 TRAP dicarboxylate transporter-DctP subunit.
       0.434
ACS20528.1
KEGG: bra:BRADO0957 TrapT family, DctQ subunit C4-dicarboxylate transport.
       0.434
ACS22772.1
PFAM: regulatory protein TetR; KEGG: bja:blr4990 transcriptional regulatory protein.
  
 
   0.432
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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