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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20544.1PFAM: alpha/beta hydrolase fold; KEGG: bpa:BPP1032 putative hydrolase. (303 aa)    
Predicted Functional Partners:
ACS20543.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_1422 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.
   
 
 0.564
ACS20542.1
KEGG: dia:Dtpsy_1036 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; PFAM: peptidase M20; peptidase dimerisation domain protein.
   
 
 0.553
ACS17328.1
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: xau:Xaut_3216 alpha/beta hydrolase fold.
  
     0.520
ACS20541.1
Urate catabolism protein; KEGG: aav:Aave_1111 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase.
       0.515
ACS20540.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_1425 transcriptional regulator, GntR family.
       0.505
ACS22833.1
PFAM: alpha/beta hydrolase fold; KEGG: sme:SM_b20216 putative epoxide hydrolase protein.
  
     0.472
ACS22041.1
PFAM: alpha/beta hydrolase fold; KEGG: smd:Smed_3910 alpha/beta hydrolase fold.
  
     0.460
ACS17780.1
PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_3189 alpha/beta hydrolase.
  
     0.404
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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