close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20582.1PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbt:BBta_1261 hypothetical protein. (360 aa)    
Predicted Functional Partners:
ACS18356.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mms:mma_1674 hypothetical protein.
  
     0.770
ACS21985.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: swi:Swit_1875 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.667
ACS18145.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: vei:Veis_2678 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.659
ACS18154.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: vei:Veis_2669 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.645
ACS17299.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: azo:azo1122 putative dioxygenase, hydroxylase small component.
 
 
 0.607
ACS18355.1
KEGG: mms:mma_1671 hypothetical protein.
  
     0.553
ACS20903.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bbr:BB0276 ring hydroxylating beta subunit.
  
 
 0.534
ACS21950.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: pol:Bpro_0984 aromatic-ring-hydroxylating dioxygenase, beta subunit.
  
 
 0.534
ACS21366.1
PFAM: FAD linked oxidase domain protein; KEGG: kpe:KPK_2291 FAD-binding protein.
  
     0.467
ACS20584.1
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_1083 CMP/dCMP deaminase, zinc-binding.
       0.417
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.