STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20594.1TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dac:Daci_2953 TonB-dependent siderophore receptor. (719 aa)    
Predicted Functional Partners:
ACS20358.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: aav:Aave_3729 amino acid adenylation domain-containing protein.
  
  
 0.766
ACS18459.1
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: lch:Lcho_1570 2OG-Fe(II) oxygenase.
 
  
 0.738
ACS20333.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_2807 TonB-dependent receptor.
 
  
 0.611
ACS20595.1
PFAM: protein of unknown function DUF466; KEGG: bph:Bphy_6472 hypothetical protein.
 
     0.540
ACS20593.1
KEGG: dac:Daci_3683 hypothetical protein.
       0.516
ACS20596.1
PFAM: carbon starvation protein CstA; KEGG: aav:Aave_4228 carbon starvation protein CstA.
 
     0.506
ACS21213.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pap:PSPA7_0271 TonB-dependent receptor.
 
  
 0.502
ACS17953.1
Procollagen-proline dioxygenase; KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
  
  
 0.453
ACS20362.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: aav:Aave_3733 amino acid adenylation domain-containing protein.
 
  
 0.429
ACS19021.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A1495 TonB-dependent siderophore receptor, putative.
 
  
0.420
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.