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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20658.1TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpm:BURPS1710b_1218 putative hydrolase. (228 aa)    
Predicted Functional Partners:
ACS20657.1
Hypothetical protein.
       0.773
ACS19975.1
PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: reu:Reut_A1258 MFS family nucleoside/H(+) symporter.
  
  
 0.635
ACS20659.1
PFAM: General substrate transporter; KEGG: mpt:Mpe_A1745 putative membrane transport protein.
       0.564
ACS18626.1
KEGG: rfr:Rfer_2160 trehalose synthase-like; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain.
  
  
 0.449
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
 
  
 0.427
ACS18630.1
KEGG: rfr:Rfer_2156 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
     
 0.408
ACS20662.1
TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: mpt:Mpe_A1742 cytochrome ubiquinol oxidase subunit III.
     
 0.407
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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