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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20667.1TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: net:Neut_0487 channel protein, hemolysin III family protein. (220 aa)    
Predicted Functional Partners:
ACS20660.1
TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; KEGG: mpt:Mpe_A1744 putative cytochrome o ubiquinol oxidase chain II protein.
     
 0.782
ACS20661.1
KEGG: mpt:Mpe_A1743 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
       0.780
ACS20663.1
TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bbr:BB1307 cytochrome ubiquinol oxidase subunit IV.
       0.780
ACS20665.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mms:mma_2635 two-component sensor histidine kinase.
       0.780
ACS20666.1
Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: mpt:Mpe_A1738 two-component response regulator.
       0.780
ACS20662.1
TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: mpt:Mpe_A1742 cytochrome ubiquinol oxidase subunit III.
       0.773
ACS20664.1
PFAM: Surfeit locus 1 family protein; KEGG: bbt:BBta_2034 putative SURF1 family protein.
       0.773
ACS20659.1
PFAM: General substrate transporter; KEGG: mpt:Mpe_A1745 putative membrane transport protein.
  
  
 0.520
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.499
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.416
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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