close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20669.1KEGG: xau:Xaut_0674 hypothetical protein. (494 aa)    
Predicted Functional Partners:
ACS20668.1
PFAM: SlyX family protein; KEGG: bbr:BB1266 hypothetical protein.
       0.773
ACS17329.1
KEGG: smt:Smal_0457 NAD-dependent epimerase/dehydratase.
   
    0.744
ACS19149.1
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: mms:mma_1856 NADH-flavin reductase.
   
    0.744
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
  
     0.696
ACS17167.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: mgm:Mmc1_2695 filamentous haemagglutinin family outer membrane protein.
  
     0.651
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.650
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
 
     0.647
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
     0.629
ACS22531.1
TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: dar:Daro_3199 VCBS.
  
     0.625
ACS21066.1
PFAM: outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein.
  
     0.623
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.