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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20672.1KEGG: pol:Bpro_0941 hypothetical protein. (137 aa)    
Predicted Functional Partners:
ACS20673.1
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: pna:Pnap_0837 formate dehydrogenase, gamma subunit.
  
    0.845
ACS20674.1
KEGG: dia:Dtpsy_2789 putative lipoprotein.
  
    0.805
ACS20676.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: pna:Pnap_0834 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.805
fdhD-2
Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.791
ACS20675.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_0835 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.790
ACS20677.1
KEGG: pol:Bpro_0936 twin-arginine translocation pathway signal.
       0.766
ACS20670.1
PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 hypothetical protein.
       0.657
ACS20678.1
PFAM: cytoplasmic chaperone TorD family protein; KEGG: pol:Bpro_0935 cytoplasmic chaperone TorD.
  
    0.520
ACS20679.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.496
ACS20668.1
PFAM: SlyX family protein; KEGG: bbr:BB1266 hypothetical protein.
       0.448
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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