close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20747.1PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3650 extracellular solute-binding protein. (437 aa)    
Predicted Functional Partners:
ACS20748.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3651 binding-protein-dependent transport systems inner membrane component.
 
 0.994
ugpE-2
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.994
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.979
ACS20614.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02751 sn-glycerol-3-phosphate ABC transporter, permease protein.
 
 0.978
ACS20750.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3653 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 0.977
ACS20615.1
PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL90111 putative periplasmic component of ABC transporter.
  
  
 
0.914
ACS22829.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3816 binding-protein-dependent transport systems inner membrane component.
 
 
 0.711
ACS20302.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1242 binding-protein-dependent transport systems inner membrane component.
 
 
 0.700
ACS19967.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3719 sugar ABC transporter, permease protein, putative.
 
 
 0.686
ACS22292.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2730 ABC transporter permease.
 
 
 0.672
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.