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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20760.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL2545 hypothetical protein. (146 aa)    
Predicted Functional Partners:
ACS22345.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rfr:Rfer_2843 bifunctional deaminase-reductase-like.
 
  
 0.735
ACS22760.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: cvi:CV_3295 hypothetical protein.
 
  
 0.697
ACS20761.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0771 GCN5-related N-acetyltransferase.
 
     0.692
ACS20762.1
PFAM: protein of unknown function DUF925; KEGG: cvi:CV_4214 hypothetical protein.
       0.550
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.497
ACS22032.1
PFAM: NmrA family protein; KEGG: bpy:Bphyt_2341 NmrA family protein.
  
    0.443
ACS20679.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
  
 0.442
ACS20758.1
KEGG: scl:sce0815 hypothetical protein.
       0.441
ACS20759.1
Hypothetical protein.
       0.441
ACS22074.1
Glutamate synthase (NADPH); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_2800 4Fe-4S ferredoxin, iron-sulfur binding.
  
  
 0.433
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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