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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20775.1KEGG: bam:Bamb_3105 hypothetical protein. (386 aa)    
Predicted Functional Partners:
ACS20804.1
KEGG: rme:Rmet_3742 peptidoglycan hydrolase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
 
  
 0.987
ACS20785.1
TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: bpt:Bpet2143 flagellar biosynthesis chaperone FliJ.
 
  
 0.978
ACS20790.1
PFAM: flagellar biosynthesis protein FliO; KEGG: reu:Reut_B5882 flagellar biosynthesis protein, FliO.
 
  
 0.970
ACS20787.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.962
ACS20777.1
TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: eca:ECA1729 flagellar protein FliS.
 
  
 0.958
ACS20783.1
PFAM: flagellar assembly protein FliH; KEGG: rme:Rmet_5263 flagellar assembly protein H.
 
  
 0.958
ACS20778.1
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.951
ACS20815.1
PFAM: FlgN family protein; KEGG: bmj:BMULJ_00209 flagella synthesis protein.
 
  
 0.950
ACS20755.1
PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: cti:RALTA_B0270 putative flagellar biosynthesis protein, flagella-associated GTP-binding protein; GTP-binding SRP family.
 
  
 0.935
ACS20788.1
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: rme:Rmet_5298 flagellar motor switch protein FliM.
 
  
 0.933
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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