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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20862.1KEGG: rfr:Rfer_1148 hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACS20863.1
Hypothetical protein; KEGG: afw:Anae109_2387 histidine kinase.
       0.558
ACS20864.1
Hypothetical protein; KEGG: DIAPH3; diaphanous homolog 3 (Drosophila); K05745 diaphanous 3.
       0.543
ACS20865.1
Porin; KEGG: vei:Veis_4644 porin.
       0.407
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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