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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20882.1KEGG: reu:Reut_B5234 hypothetical protein. (433 aa)    
Predicted Functional Partners:
ACS20880.1
KEGG: bpl:BURPS1106A_A0996 glycosyl transferase, group 2 family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: glycosyl transferase family 2; outer membrane efflux protein.
  
 
 0.854
ACS20094.1
PFAM: protein of unknown function DUF214; KEGG: pna:Pnap_1153 hypothetical protein.
  
  
 0.705
ACS20881.1
KEGG: reu:Reut_B5235 hypothetical protein.
       0.663
ACS21068.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: dac:Daci_2079 ABC transporter related.
  
 
 0.645
ACS21206.1
KEGG: ppw:PputW619_4382 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
 
 0.645
ACS17523.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bav:BAV2025 outer membrane multidrug efflux protein.
  
 
 0.487
ACS18387.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bbr:BB2379 outer membrane efflux protein.
  
 
 0.487
ACS19039.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pna:Pnap_3900 RND efflux system outer membrane lipoprotein.
  
 
 0.487
ACS19190.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: hypothetical protein.
  
 
 0.487
ACS20108.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_3236 RND efflux system, outer membrane lipoprotein, NodT.
  
 
 0.487
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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