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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20889.1PFAM: Asp/Glu/hydantoin racemase; KEGG: pol:Bpro_0552 Asp/Glu racemase. (251 aa)    
Predicted Functional Partners:
ACS20890.1
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pol:Bpro_0551 dihydropyrimidinase.
 
     0.854
ACS20891.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3887 Asp/Glu racemase.
 
     0.825
ACS20888.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_0549 transcriptional regulator, GntR family.
 
     0.785
ACS20893.1
PFAM: major facilitator superfamily MFS_1; KEGG: rpi:Rpic_4020 major facilitator superfamily MFS_1.
 
     0.614
ACS20549.1
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: aav:Aave_1098 permease for cytosine/purines, uracil, thiamine, allantoin.
 
     0.592
ACS20892.1
PFAM: beta-lactamase; KEGG: reu:Reut_A0047 beta-lactamase.
       0.558
ACS20887.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3769 LysR family transcriptional regulator.
       0.552
ACS17092.1
PFAM: polysaccharide deacetylase; KEGG: vei:Veis_3554 hypothetical protein.
 
     0.504
ACS22193.1
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vei:Veis_0725 dihydropyrimidinase.
 
     0.496
ACS20151.1
KEGG: pol:Bpro_1010 twin-arginine translocation pathway signal.
 
     0.435
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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