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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20905.1KEGG: reu:Reut_B3788 hypothetical protein. (347 aa)    
Predicted Functional Partners:
ACS20896.1
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: reh:H16_B0812 hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
 
  
 0.979
ACS20906.1
PFAM: isochorismatase hydrolase; KEGG: bpe:BP1958 putative isochorismatase.
 
  
 0.931
ACS20903.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bbr:BB0276 ring hydroxylating beta subunit.
 
     0.819
maiA
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.810
ACS20904.1
PFAM: amidohydrolase 2; KEGG: reh:H16_B0810 amidohydrolase family protein.
 
     0.800
ACS20902.1
PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bbr:BB0277 ring hydroxylating alpha subunit.
 
     0.787
ACS20891.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3887 Asp/Glu racemase.
 
  
 0.681
ACS20900.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbr:BB0279 ferredoxin.
 
     0.639
ACS20901.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpe:BP0585 putative ferredoxin reductase.
       0.572
ACS20907.1
PFAM: Extracellular ligand-binding receptor; KEGG: rle:RL3906 putative solute-binding component of ABC transporter.
       0.553
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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