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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20906.1PFAM: isochorismatase hydrolase; KEGG: bpe:BP1958 putative isochorismatase. (213 aa)    
Predicted Functional Partners:
ACS20896.1
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: reh:H16_B0812 hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
 
 0.962
maiA
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
 
 0.945
ACS20891.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3887 Asp/Glu racemase.
 
  
 0.933
ACS20905.1
KEGG: reu:Reut_B3788 hypothetical protein.
 
  
 0.931
ACS21986.1
PFAM: isochorismatase hydrolase; KEGG: swi:Swit_1876 isochorismatase hydrolase.
  
     0.767
ACS21455.1
PFAM: isochorismatase hydrolase; KEGG: mpo:Mpop_4344 isochorismatase hydrolase.
  
   
 0.764
ACS20904.1
PFAM: amidohydrolase 2; KEGG: reh:H16_B0810 amidohydrolase family protein.
 
     0.754
ACS20902.1
PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bbr:BB0277 ring hydroxylating alpha subunit.
 
     0.713
ACS20903.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bbr:BB0276 ring hydroxylating beta subunit.
 
     0.704
rutB
Isochorismatase hydrolase; In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2; Belongs to the isochorismatase family. RutB subfamily.
  
     0.702
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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