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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20912.1PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_1554 major facilitator transporter. (413 aa)    
Predicted Functional Partners:
ACS20913.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swi:Swit_1725 LysR family transcriptional regulator.
  
    0.692
ACS20911.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_1436 branched-chain amino acid ABC transporter ATP-binding protein.
  
    0.653
ACS20908.1
PFAM: inner-membrane translocator; KEGG: bcs:BCAN_B0649 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
       0.651
ACS20909.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.651
ACS20910.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003686 probable branched-chain amino acid ABC transporter, ATP-binding protein.
       0.651
ACS20907.1
PFAM: Extracellular ligand-binding receptor; KEGG: rle:RL3906 putative solute-binding component of ABC transporter.
       0.618
ACS20905.1
KEGG: reu:Reut_B3788 hypothetical protein.
     
 0.465
ACS20906.1
PFAM: isochorismatase hydrolase; KEGG: bpe:BP1958 putative isochorismatase.
  
  
 0.459
ACS20315.1
PFAM: extracellular solute-binding protein family 1; KEGG: bmj:BMULJ_01151 iron(III) transport system substrate-binding protein.
 
  
 0.452
ACS20904.1
PFAM: amidohydrolase 2; KEGG: reh:H16_B0810 amidohydrolase family protein.
       0.416
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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