close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20922.1PFAM: protein of unknown function DUF35; KEGG: mno:Mnod_3484 protein of unknown function DUF35. (119 aa)    
Predicted Functional Partners:
ACS20921.1
Propanoyl-CoA C-acyltransferase; PFAM: Thiolase; KEGG: reh:H16_B1903 probable lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
       0.791
ACS20920.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mno:Mnod_3482 short-chain dehydrogenase/reductase SDR.
       0.768
ACS20919.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpt:Bpet0470 acyl-CoA transferases/carnitine dehydratase family protein; Belongs to the CoA-transferase III family.
       0.630
ACS20918.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_4267 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.618
ACS20923.1
PFAM: protein of unknown function DUF453; KEGG: rsk:RSKD131_4240 methylitaconate delta2-delta3-isomerase.
       0.502
ACS20924.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_3063 short-chain dehydrogenase/reductase SDR.
       0.445
ACS20917.1
PFAM: conserved hypothetical protein; KEGG: cti:RALTA_B1327 conserved hypothetical protein; putative exported protein; UPF0065.
       0.415
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.