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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20951.1KEGG: pol:Bpro_1298 hypothetical protein. (655 aa)    
Predicted Functional Partners:
ACS20950.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.816
ACS21229.1
PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein.
  
     0.768
ACS18052.1
KEGG: pol:Bpro_3636 putative transmembrane protein.
  
     0.767
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.739
ACS17794.1
PFAM: Pilus assembly protein PilP; KEGG: rfr:Rfer_2922 pilus assembly protein, PilQ.
  
     0.732
ACS18069.1
KEGG: aav:Aave_1218 putative transmembrane protein.
  
     0.727
ACS20938.1
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: pol:Bpro_1337 serine/threonine protein kinase.
  
     0.721
ACS21790.1
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: rfr:Rfer_3940 FHA domain-containing protein.
  
     0.716
ACS18284.1
KEGG: rfr:Rfer_2980 putative signal peptide protein.
  
     0.714
ACS19382.1
KEGG: pna:Pnap_2002 hypothetical protein.
  
     0.706
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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