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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20966.1PFAM: extracellular solute-binding protein family 5; KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5. (495 aa)    
Predicted Functional Partners:
ACS20961.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0135 binding-protein-dependent transport systems inner membrane component.
 
 0.898
ACS20962.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0136 binding-protein-dependent transport systems inner membrane component.
 
 
 0.896
ACS20967.1
PFAM: Amidase; KEGG: dia:Dtpsy_0815 amidase.
 
     0.823
ACS22578.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_3805 binding-protein-dependent transport systems inner membrane component.
 
 0.653
ACS20965.1
PFAM: extracellular solute-binding protein family 5; KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5.
 
  
 
0.632
ACS22577.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2552 peptide/opine/nickel ABC transporter, permease/ATP-binding protein.
 
 
 0.631
ACS17740.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2112 binding-protein-dependent transport systems inner membrane component.
 
 0.627
ACS21836.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0425 binding-protein-dependent transport systems inner membrane component.
 
 0.626
ACS22521.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV2613 ABC transporter, permease protein.
 
 
 0.625
ACS21835.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0424 binding-protein-dependent transport systems inner membrane component.
 
 0.616
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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