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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20970.1PFAM: 4-oxalocrotonate tautomerase; KEGG: aav:Aave_3464 4-oxalocrotonate tautomerase. (132 aa)    
Predicted Functional Partners:
ACS16741.1
TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pfo:Pfl01_0300 4-oxalocrotonate tautomerase.
     
  0.900
ACS22613.1
TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase.
     
  0.900
ACS20971.1
KEGG: cti:RALTA_B1962 hypothetical protein.
       0.678
ACS20969.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_3463 LysR family transcriptional regulator.
 
     0.663
ACS20815.1
PFAM: FlgN family protein; KEGG: bmj:BMULJ_00209 flagella synthesis protein.
  
     0.568
ACS21086.1
PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_3508 major facilitator superfamily oxalate/formate antiporter.
  
     0.480
ACS20968.1
PFAM: protein of unknown function DUF161; KEGG: aav:Aave_3836 hypothetical protein.
       0.478
ACS22064.1
PFAM: DoxX family protein; KEGG: reu:Reut_B4847 DoxX.
  
     0.477
ACS20972.1
N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; amidohydrolase; Amidohydrolase 3; KEGG: swd:Swoo_3252 N-acyl-D-amino-acid deacylase.
       0.458
ACS21098.1
TIGRFAM: oxalyl-CoA decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: pol:Bpro_2800 putative oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
 
   
 0.450
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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