close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20972.1N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; amidohydrolase; Amidohydrolase 3; KEGG: swd:Swoo_3252 N-acyl-D-amino-acid deacylase. (531 aa)    
Predicted Functional Partners:
ACS17870.1
PFAM: alanine racemase domain protein; KEGG: vei:Veis_3329 D-serine deaminase.
 
   
 0.656
ACS20971.1
KEGG: cti:RALTA_B1962 hypothetical protein.
       0.524
ACS21880.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rme:Rmet_3696 peptidase M20.
 
    0.483
ACS20970.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: aav:Aave_3464 4-oxalocrotonate tautomerase.
       0.458
ACS22757.1
PFAM: alanine racemase domain protein; KEGG: dac:Daci_0971 alanine racemase domain-containing protein.
 
   
 0.408
ACS18871.1
PFAM: alanine racemase domain protein; KEGG: sal:Sala_3175 threonine aldolase family protein.
 
   
 0.404
ACS21336.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_1203 glutamate carboxypeptidase.
 
    0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.