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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20999.1KEGG: pol:Bpro_1248 hypothetical protein. (69 aa)    
Predicted Functional Partners:
ACS21000.1
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: vei:Veis_1382 cytochrome c oxidase assembly protein.
 
    0.893
ACS20995.1
KEGG: ajs:Ajs_3529 hypothetical protein.
 
    0.797
ACS18077.1
PFAM: protein of unknown function DUF339; KEGG: pol:Bpro_3604 protein of unknown function DUF339.
  
     0.748
ACS21004.1
KEGG: pol:Bpro_1244 putative transmembrane protein.
 
     0.748
ACS20998.1
PFAM: cytochrome c oxidase subunit III; KEGG: pol:Bpro_1249 cytochrome c oxidase, subunit III.
 
    0.709
ACS17402.1
KEGG: aav:Aave_4509 hypothetical protein.
  
     0.700
ACS21003.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.695
ACS20703.1
KEGG: pol:Bpro_0907 hypothetical protein.
  
     0.690
ACS21001.1
KEGG: ajs:Ajs_3535 hypothetical protein.
       0.686
ACS20997.1
KEGG: pol:Bpro_1250 putative transmembrane protein.
  
     0.674
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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