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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21005.1KEGG: aav:Aave_3908 biotin synthesis protein BioC. (304 aa)    
Predicted Functional Partners:
ACS16696.1
PFAM: Beta-ketoacyl synthase; KEGG: dar:Daro_1172 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.904
ACS16925.1
PFAM: Beta-ketoacyl synthase; KEGG: xcb:XC_4087 3-oxoacyl-(acyl carrier protein) synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.904
ACS17202.1
KEGG: pae:PA0098 3-oxoacyl-(acyl carrier protein) synthase.
    
 0.904
ACS18044.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
    
 0.904
ACS18496.1
PFAM: Beta-ketoacyl synthase; KEGG: dar:Daro_1172 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.904
ACS20000.1
PFAM: Beta-ketoacyl synthase; KEGG: rfr:Rfer_3977 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.904
ACS21073.1
PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein.
 
     0.720
ACS21006.1
KEGG: rfr:Rfer_1678 ComF family protein.
  
  
 0.714
ACS18479.1
PFAM: protein of unknown function DUF498; KEGG: aav:Aave_1236 hypothetical protein.
  
     0.684
ACS17628.1
PFAM: protein of unknown function DUF185; KEGG: rfr:Rfer_0812 hypothetical protein.
  
    0.677
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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