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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21012.1PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2. (288 aa)    
Predicted Functional Partners:
ACS21014.1
PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_0796 feruloyl-CoA synthase.
 
  
 0.885
ACS21013.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_0605 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.854
ACS16734.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dar:Daro_3240 feruloyl-CoA synthase.
 
  
 0.743
ACS18847.1
KEGG: dac:Daci_2822 hypothetical protein; Belongs to the UPF0311 family.
 
  
 0.685
ACS19009.1
KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
  
 0.674
ACS21018.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pna:Pnap_0603 MarR family transcriptional regulator.
 
     0.601
ACS21015.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3114 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.582
ACS21075.1
TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bcj:BCAM1300 protocatechuate 3,4-dioxygenase beta chain.
  
     0.550
ACS21076.1
KEGG: bph:Bphy_3890 protocatechuate 3,4-dioxygenase, alpha subunit; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase.
  
     0.543
ACS19938.1
4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pst:PSPTO_2346 4-hydroxyphenylpyruvate dioxygenase, putative.
 
    0.534
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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