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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21018.1Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pna:Pnap_0603 MarR family transcriptional regulator. (163 aa)    
Predicted Functional Partners:
ACS21014.1
PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_0796 feruloyl-CoA synthase.
 
     0.708
ACS21017.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_3118 acyl-CoA dehydrogenase-like.
       0.672
ACS21016.1
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0604 hypothetical protein.
       0.667
ACS21019.1
Hypothetical protein.
       0.655
ACS21012.1
PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2.
 
     0.601
ACS21013.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_0605 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.538
ACS21015.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3114 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.518
ACS18385.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2516 putative lipoprotein transmembrane.
  
  
 0.474
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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