Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS21078.1PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1222 ATPase associated with various cellular activities, AAA_5. (284 aa)    
Predicted Functional Partners:
ACS21080.1
KEGG: ajs:Ajs_3559 hypothetical protein.
 
    0.941
ACS21079.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_1220 hypothetical protein.
       0.734
ACS21077.1
PFAM: cytochrome c class I; KEGG: pol:Bpro_1223 cytochrome c, class I.
       0.581
ACS21081.1
PFAM: surface antigen (D15); KEGG: aav:Aave_3955 surface antigen (D15).
       0.550
ACS21082.1
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 hypothetical protein.
       0.527
ACS19989.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_3141 acyl-CoA dehydrogenase-like.
  
     0.467
ACS20894.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_3141 acyl-CoA dehydrogenase-like.
  
     0.463
ACS17463.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein.
  
     0.437
ACS21958.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_C6066 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region.
  
     0.422
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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