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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21091.1PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_2792 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (258 aa)    
Predicted Functional Partners:
ACS22299.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: vei:Veis_3405 hypothetical protein.
    
 0.887
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
    0.643
ACS21090.1
KEGG: mms:mma_0393 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein.
       0.639
ACS21138.1
PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: aav:Aave_1379 restriction endonuclease.
  
    0.600
ACS16952.1
KEGG: pol:Bpro_2997 homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase.
  
  
 0.559
ACS21089.1
KEGG: tmz:Tmz1t_1294 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
  
   0.521
ACS22629.1
PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_5996 alpha/beta hydrolase fold.
 
  
 0.474
ACS19752.1
TIGRFAM: precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; KEGG: reh:H16_B0204 succinate dehydrogenase/fumarate reductase,flavoprotein.
  
    0.438
ACS16905.1
KEGG: bpy:Bphyt_5827 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B.
  
  
 0.421
ACS16904.1
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_0102 5-carboxymethyl-2-hydroxymuconate isomerase.
  
  
 0.407
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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