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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21108.1PFAM: plasmid stabilization system; KEGG: mpt:Mpe_A1668 hypothetical protein. (108 aa)    
Predicted Functional Partners:
ACS22211.1
KEGG: mpt:Mpe_A1667 hypothetical protein.
 
 
 0.935
ACS22498.1
KEGG: xcv:XCV1188 hypothetical protein.
 
 
 0.928
ACS22104.1
KEGG: vei:Veis_2291 CopG/Arc/MetJ family transcriptional regulator.
 
 
 0.915
ACS22839.1
Hypothetical protein; KEGG: dac:Daci_5158 CopG/Arc/MetJ family addiction module antidote protein.
  
 
 0.697
ACS22419.1
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: pde:Pden_3591 addiction module antitoxin, RelB/DinJ family.
   
   0.617
ACS21926.1
KEGG: Os03g0103300; hypothetical protein.
  
     0.582
ACS22602.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pna:Pnap_4085 integral membrane sensor signal transduction histidine kinase.
  
     0.568
ACS21107.1
Hypothetical protein.
       0.535
ACS17043.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc3160 two component sensor histidine kinase transcription regulator protein.
  
     0.530
ACS20235.1
PFAM: DNA polymerase beta domain protein region; KEGG: pol:Bpro_5352 DNA polymerase, beta-like region.
 
     0.478
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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