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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21129.1PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rso:RS02577 activation/secretion protein. (582 aa)    
Predicted Functional Partners:
ACS21132.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: rso:RS02477 hemagglutinin-related protein.
 
 
 0.909
ACS22912.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: rso:RS02477 hemagglutinin-related protein.
 
 
 0.860
ACS18569.1
KEGG: pcr:Pcryo_1830 P pilus assembly protein chaperone PapD-like.
 
  
 0.830
ACS22404.1
PFAM: type IV secretory pathway VirB3 family protein; KEGG: ccs:CCNA_02500 type IV secretory pathway, VirB3 protein.
   
    0.790
ACS22407.1
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: xfa:XFa0011 conjugal transfer protein.
   
  
 0.716
ACS22408.1
PFAM: VirB8 family protein; KEGG: xau:Xaut_5081 VirB8 family protein.
   
    0.705
ACS22410.1
PFAM: conjugation TrbI family protein; KEGG: xfa:XFa0014 conjugal transfer protein.
   
    0.677
ACS21128.1
KEGG: atc:AGR_L_2371 hypothetical protein.
       0.601
ACS22405.1
TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: xfa:XFa0007 conjugal transfer protein.
   
    0.578
ACS21130.1
Hypothetical protein.
       0.563
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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