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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21182.1SMART: AAA ATPase; KEGG: tmz:Tmz1t_1706 NERD domain protein. (533 aa)    
Predicted Functional Partners:
ACS21181.1
KEGG: ajs:Ajs_0810 hypothetical protein.
       0.769
ACS18085.1
PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3597 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
  
     0.533
ACS21638.1
PFAM: Domain of unknown function DUF1840; KEGG: dac:Daci_1148 hypothetical protein.
  
     0.508
ACS21183.1
PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: hha:Hhal_0909 appr-1-p processing domain-containing protein.
       0.435
ACS18416.1
TIGRFAM: phasin family protein; KEGG: dia:Dtpsy_1366 phasin family protein.
  
     0.412
ACS19668.1
KEGG: mpt:Mpe_A3276 hypothetical protein.
  
     0.403
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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