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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21186.1PFAM: metallophosphoesterase; KEGG: pna:Pnap_1662 metallophosphoesterase. (429 aa)    
Predicted Functional Partners:
ACS18530.1
KEGG: rpe:RPE_1031 hypothetical protein.
  
 0.991
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.973
ACS21185.1
PFAM: SMC domain protein; KEGG: pna:Pnap_1663 hypothetical protein.
 
 
 0.962
ACS16816.1
KEGG: ajs:Ajs_0084 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: HRDC domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein.
  
 0.860
ACS22858.1
KEGG: aav:Aave_4005 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
  
 0.860
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.848
ACS18813.1
SMART: helicase c2; KEGG: pol:Bpro_2617 helicase C2.
  
 0.791
ACS19426.1
PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: bac:BamMC406_4268 helicase C2.
  
 0.791
ACS19414.1
SMART: Ankyrin; KEGG: pol:Bpro_4103 ankyrin.
    
 0.743
ACS19474.1
Ankyrin; KEGG: pol:Bpro_2515 ankyrin.
    
 0.743
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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