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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21199.1PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: dol:Dole_2238 hypothetical protein. (707 aa)    
Predicted Functional Partners:
ACS21200.1
KEGG: bpt:Bpet4235 hypothetical protein.
       0.813
ACS21202.1
PFAM: helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: aav:Aave_0157 helicase domain-containing protein.
       0.812
ACS21203.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: aav:Aave_0156 DNA binding domain-containing protein.
  
    0.797
ACS21198.1
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mgm:Mmc1_0787 site-specific DNA-methyltransferase (adenine-specific).
  
    0.784
ACS21201.1
KEGG: ppd:Ppro_0239 hypothetical protein.
       0.784
ACS21197.1
PFAM: type III restriction protein res subunit; KEGG: dac:Daci_4204 type III restriction protein res subunit.
       0.742
ACS17803.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: aav:Aave_1008 glutamate synthase (NADH) large subunit.
     
 0.688
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.461
ACS20669.1
KEGG: xau:Xaut_0674 hypothetical protein.
  
    0.461
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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