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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21208.1KEGG: cja:CJA_1396 putative hemolysin; TIGRFAM: outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Cadherin; coagulase; SMART: von Willebrand factor type A; Cadherin. (1867 aa)    
Predicted Functional Partners:
ACS22531.1
TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: dar:Daro_3199 VCBS.
 
0.948
ACS22515.1
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: pna:Pnap_0406 hypothetical protein.
 
 0.945
ACS22514.1
TIGRFAM: conserved repeat domain protein; KEGG: pna:Pnap_0407 hypothetical protein.
 
 0.937
ACS18919.1
YD repeat protein; KEGG: sdn:Sden_3683 peptidoglycan-binding LysM; TIGRFAM: YD repeat protein; PFAM: Peptidoglycan-binding LysM; YD repeat-containing protein; SMART: Peptidoglycan-binding LysM.
  
 0.925
ACS21206.1
KEGG: ppw:PputW619_4382 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
  
 0.850
ACS21207.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ppf:Pput_0829 TolC family type I secretion outer membrane protein.
 
  
 0.811
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
  
  
 0.767
ACS21066.1
PFAM: outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein.
 
  
 0.757
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
 
    0.757
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
 
    0.752
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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