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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21232.1PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cti:RALTA_A0721 rubredoxin. (56 aa)    
Predicted Functional Partners:
ACS21948.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B4722 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.883
ACS19469.1
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: pol:Bpro_3276 assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
  
 
 0.868
ACS20145.1
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: pol:Bpro_3276 assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
  
 
 0.868
ACS22197.1
PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; HI0933 family protein; KEGG: vei:Veis_0721 FAD dependent oxidoreductase.
  
 
 0.851
ACS21233.1
PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pol:Bpro_1134 putative phosphomethylpyrimidine kinase.
  
    0.660
ACS21230.1
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pna:Pnap_3353 response regulator receiver protein.
     
 0.650
ACS21229.1
PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein.
     
 0.647
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: aav:Aave_0898 glutamate-1-semialdehyde 2,1-aminomutase.
     
 0.600
ACS21231.1
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rfr:Rfer_1371 response regulator receiver domain-containing protein.
     
 0.583
ACS21228.1
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pol:Bpro_1139 methyl-accepting chemotaxis sensory transducer.
       0.562
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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