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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21242.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2132 ABC transporter related. (539 aa)    
Predicted Functional Partners:
ACS21241.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_4196 periplasmic binding protein/LacI transcriptional regulator.
 
 0.993
ACS21243.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_2131 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.993
ACS17005.1
PFAM: inner-membrane translocator; KEGG: bac:BamMC406_4722 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.973
ACS21921.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1087 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.972
ACS17034.1
PFAM: inner-membrane translocator; KEGG: rle:pRL120758 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.971
ACS21469.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_3273 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.970
ACS19962.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.908
ACS19971.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_3204 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.869
ACS17007.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3236 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.834
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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