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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21250.1PFAM: peptidase M61 domain protein; KEGG: pol:Bpro_1123 peptidase M61. (618 aa)    
Predicted Functional Partners:
ACS21249.1
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
     0.884
ACS21248.1
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: aav:Aave_0885 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
       0.778
ACS21251.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_1529 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.640
ACS21247.1
PFAM: MOSC domain protein beta barrel domain protein; MOSC domain containing protein; KEGG: pna:Pnap_3365 MOSC domain-containing protein.
       0.604
ACS18319.1
KEGG: pna:Pnap_2770 membrane protein-like protein.
  
     0.465
ACS18282.1
PFAM: molybdopterin binding domain; KEGG: pol:Bpro_1806 molybdopterin binding domain.
  
     0.458
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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