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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21257.1KEGG: aav:Aave_3904 putative transmembrane protein. (62 aa)    
Predicted Functional Partners:
ACS21258.1
KEGG: mpt:Mpe_A0754 putative cytochrome c.
       0.791
ACS21259.1
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: mpt:Mpe_A0755 putative alcohol dehydrogenase cytochrome c subunit precursor.
       0.791
ACS21255.1
PFAM: 2OG-Fe(II) oxygenase; KEGG: dac:Daci_3795 2OG-Fe(II) oxygenase.
       0.544
ACS21256.1
Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pna:Pnap_2093 GntR family transcriptional regulator.
       0.544
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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