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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21260.1PFAM: metallophosphoesterase; KEGG: dia:Dtpsy_1122 metallophosphoesterase. (289 aa)    
Predicted Functional Partners:
ACS18932.1
KEGG: rfr:Rfer_2028 hypothetical protein.
 
    0.621
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.575
ACS21261.1
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reh:H16_A0270 Co/Zn/Cd efflux system component.
       0.549
ACS21263.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: azo:azo0663 CDP-alcohol phosphatidyltransferase family protein.
     
 0.484
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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