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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21265.1PFAM: Dual specificity protein phosphatase; KEGG: smt:Smal_3658 putative dual specificity phosphatase. (449 aa)    
Predicted Functional Partners:
ACS21264.1
PFAM: alpha/beta hydrolase fold; KEGG: pfl:PFL_6196 hypothetical protein.
 
  
 0.960
ACS21268.1
PFAM: phosphatidate cytidylyltransferase; KEGG: reh:H16_A2088 phosphatidate cytidylyltransferase.
 
    0.953
ACS21263.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: azo:azo0663 CDP-alcohol phosphatidyltransferase family protein.
 
 
 0.947
ACS21266.1
KEGG: pmy:Pmen_0007 hypothetical protein.
  
    0.921
ACS21267.1
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: cti:RALTA_A1715 putative phospholipid/glycerol acyltransferase.
 
 
 0.917
ACS17582.1
PFAM: phosphatidate cytidylyltransferase; KEGG: pol:Bpro_1084 phosphatidate cytidylyltransferase.
 
    0.873
ACS17583.1
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: aav:Aave_0835 phospholipid/glycerol acyltransferase.
 
 
 0.798
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
 0.756
ACS19414.1
SMART: Ankyrin; KEGG: pol:Bpro_4103 ankyrin.
   
 0.688
ACS19474.1
Ankyrin; KEGG: pol:Bpro_2515 ankyrin.
   
 0.688
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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