close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21275.1KEGG: bpy:Bphyt_2086 hypothetical protein. (164 aa)    
Predicted Functional Partners:
ACS21276.1
PFAM: OmpA/MotB domain protein; KEGG: dar:Daro_1992 OmpA/MotB.
 
     0.871
ACS21789.1
Adenylate/guanylate cyclase with Chase sensor; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mfa:Mfla_2129 adenylate/guanylate cyclase.
 
     0.827
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.571
ACS21274.1
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pol:Bpro_4099 cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.569
ACS21052.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rfr:Rfer_1347 ErfK/YbiS/YcfS/YnhG.
  
   
 0.542
ACS16771.1
Adenylate/guanylate cyclase with integral membrane sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sfu:Sfum_2802 adenylate/guanylate cyclase.
 
     0.536
ACS19975.1
PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: reu:Reut_A1258 MFS family nucleoside/H(+) symporter.
  
     0.456
ACS21066.1
PFAM: outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein.
 
     0.434
ACS19505.1
KEGG: rfr:Rfer_0625 hypothetical protein.
  
     0.416
ACS21788.1
PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase.
 
     0.415
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.