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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21295.1TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: pol:Bpro_4133 HAD-superfamily hydrolase subfamily IIB. (275 aa)    
Predicted Functional Partners:
ACS18426.1
PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3076 major facilitator superfamily MFS_1.
 
    0.641
ACS17427.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase.
  
 
 0.588
ACS21293.1
KEGG: reu:Reut_A1068 putative ABC transporter permease protein.
       0.554
ACS21294.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_A1069 ABC transporter related.
       0.554
ACS19727.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.511
ACS21863.1
PFAM: Nucleotidyl transferase; KEGG: pna:Pnap_4057 nucleotidyl transferase.
  
  
 0.509
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: rfr:Rfer_1127 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.508
ACS19715.1
KEGG: vei:Veis_3631 hypothetical protein.
 
  
 0.461
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
  
 0.445
ACS17626.1
PFAM: dihydroneopterin aldolase; KEGG: rfr:Rfer_0814 dihydroneopterin aldolase.
 
   
 0.439
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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