STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21300.1TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_2912 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (430 aa)    
Predicted Functional Partners:
ACS21306.1
KEGG: pol:Bpro_2917 succinate semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.949
ACS16973.1
PFAM: Aldehyde Dehydrogenase; KEGG: rfr:Rfer_0880 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.930
ACS18301.1
PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2805 aldehyde dehydrogenase.
 
 0.930
ACS18598.1
KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.930
ACS18971.1
PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_2290 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 0.930
ACS19875.1
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating].
  
 0.930
ACS19889.1
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: dac:Daci_0980 methylmalonate-semialdehyde dehydrogenase.
  
 0.930
ACS20534.1
PFAM: Aldehyde Dehydrogenase; KEGG: bpy:Bphyt_2203 aldehyde dehydrogenase.
 
 0.930
ACS22231.1
KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.930
ACS22548.1
PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_A1842 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.930
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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