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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21302.1PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_2914 extracellular solute-binding protein, family 1. (342 aa)    
Predicted Functional Partners:
ACS21303.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
 
  
 0.985
ACS21304.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2916 binding-protein-dependent transport systems inner membrane component.
 
  
 0.975
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.948
ACS20152.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2471 binding-protein-dependent transport systems inner membrane component.
 
  
 0.874
ACS16970.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0888 binding-protein-dependent transport systems inner membrane component.
 
  
 0.854
ACS16969.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0887 binding-protein-dependent transport systems inner membrane component.
 
  
 0.850
ACS20153.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1008 binding-protein-dependent transport systems inner membrane component.
 
  
 0.798
ACS17914.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component.
 
  
 0.739
ACS22128.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4848 ABC transporter, inner membrane subunit.
 
  
 0.733
ACS21305.1
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pna:Pnap_2635 putative agmatinase; Belongs to the arginase family.
 
   
 0.718
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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