close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21305.1TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pna:Pnap_2635 putative agmatinase; Belongs to the arginase family. (318 aa)    
Predicted Functional Partners:
amiE
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia.
  
 0.939
ACS21300.1
TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_2912 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.925
ACS16973.1
PFAM: Aldehyde Dehydrogenase; KEGG: rfr:Rfer_0880 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.921
ACS18301.1
PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2805 aldehyde dehydrogenase.
  
 0.921
ACS18971.1
PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_2290 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 0.921
ACS22548.1
PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_A1842 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.921
ACS22834.1
PFAM: Aldehyde Dehydrogenase; KEGG: pfo:Pfl01_2261 aldehyde dehydrogenase.
  
 0.921
ACS21415.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.903
ACS17363.1
PFAM: Amidase; KEGG: pol:Bpro_3826 amidase.
    
 0.902
ACS17478.1
PFAM: Amidase; KEGG: pap:PSPA7_4912 amidase.
    
 0.902
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.