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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21312.1PFAM: DSBA oxidoreductase; KEGG: pna:Pnap_0479 DsbA oxidoreductase. (214 aa)    
Predicted Functional Partners:
ACS21314.1
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: aav:Aave_4348 YbaK/prolyl-tRNA synthetase associated region.
       0.846
ACS21313.1
PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_A4272 hypothetical protein.
       0.844
ACS21315.1
PFAM: pyruvate carboxyltransferase; KEGG: dac:Daci_5964 pyruvate carboxyltransferase.
     
 0.787
ACS17549.1
PFAM: DSBA oxidoreductase; KEGG: atc:AGR_pAT_622 hypothetical protein.
  
     0.759
ACS19715.1
KEGG: vei:Veis_3631 hypothetical protein.
  
     0.516
ACS21316.1
PFAM: acylphosphatase; KEGG: ajs:Ajs_4152 acylphosphatase.
       0.486
ACS21311.1
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_3033 major facilitator superfamily MFS_1.
       0.481
ACS17001.1
TIGRFAM: polyhydroxyalkanoic acid system protein; KEGG: pna:Pnap_3503 putative polyhydroxyalkanoic acid system protein.
  
     0.474
ACS21317.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bpt:Bpet2157 acyl-CoA dehydrogenase.
       0.474
ACS21318.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpt:Bpet2158 acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.474
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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