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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21321.1PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet2156 IclR family transcriptional regulator. (245 aa)    
Predicted Functional Partners:
ACS21320.1
PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; KEGG: cti:RALTA_A2099 conserved hypothetical protein, RmlC-like cupin domain.
 
   
 0.846
ACS16778.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: reh:H16_B0879 transcriptional regulator, IclR-family.
  
     0.774
ACS16823.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: pol:Bpro_1041 transcriptional regulator, IclR family.
  
     0.774
ACS19948.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_4439 IclR family transcriptional regulator.
  
     0.773
ACS19003.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family.
  
     0.771
ACS18760.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bxe:Bxe_A2906 IclR family transcriptional regulator.
  
     0.770
ACS19010.1
KEGG: pol:Bpro_2991 transcriptional regulator, IclR family; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
  
     0.770
ACS19832.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bch:Bcen2424_1199 IclR family transcriptional regulator.
  
     0.770
ACS22778.1
Transcriptional regulator, IclR family; PFAM: regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_1818 transcriptional regulator, IclR family.
  
     0.765
ACS22779.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_1817 transcriptional regulator, IclR family.
  
     0.765
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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